What is “Damping Off” and How Do You Prevent It?

In my opinion, there is no greater satisfaction than planting your own seeds and watching them grow into little baby seedlings.

More than just being a magical process to watch, it can also mean you get to play around with interesting varieties you might not find in your local garden center, and learn about your plants much more intimately than you would otherwise.

But then! Tragedy strikes and your seedlings come down with a serious case of “damping off.” But what is damping off, you might ask?

Spouting plants that are dying and showing signs of damping off.

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Well, this guide will explain everything you need to know about this disease and how to prevent it from affecting your seedlings.

What is Damping Off?

“Damping off” is a soil-borne fungal disease that affects seedlings, causing the rotting of stem and root tissues at and below the soil surface of the young plants.

The term is quite a general one, encompassing several disease-causing culprits, the most common of which are well-known fungal foes such as Rhizoctonia spp., Fusarium spp. and the water mold Pythium spp.

This disease affects a wide variety of vegetables and flowers. Infected plants usually germinate successfully and come up fine, but start to show signs that all is not well a few days down the line.

Young leaves, roots, and stems of newly emerged seedlings are all highly susceptible to infection.

This disease causes such major issues in the root system of the plant that seedlings infected by damping off rarely survive to produce a vigorous plant. Even worse, it is usually a large section, or an entire tray of seedlings that is killed.

In short, this fungal infection can really decimate your seedlings, and proper care needs to be taken to prevent a tragedy from occurring.

The good news is that, although mature plants can still be affected by these pathogens, from the moment your plants have mature leaves and a well-developed root system, they are much more resistant the fungus or mold that causes damping off.

There is therefore a critical period of growth between planting and maturity when special care needs to be taken to protect sensitive seedlings.

How to Identify Damping Off

The most common way damping off will present itself is when your plant stalks become water-soaked, thin and mushy, and fall over at the base and die.

The seedlings, especially the cotyledons (the first leaves produced) may have a kind of gray-brown color, and young leaves will wilt and turn from green-gray to brown.

It is also common to see a fluffy white cobweb growth on infected plants.

When you pull your plants up, you can also see signs of the disease on their root systems. Roots on infected plants are either absent, stunted, or have grayish-brown sunken spots.

Prevention and Protection Measures

I’ll give you the bad news first:

Once your plants catch a case of damping off, they’re done for. There is nothing we can do to cure this disease once it’s taken hold, and even if there was, the tiny seedlings die so quickly that there would be very little time to help even if you could.

The good news is that, as damaging as it is, there are a few practical, actionable steps you can take to see off damping off before it becomes established.

There are two P’s that you should keep in mind when it comes to damping off – prevention and protection.

Prevention Tips

Preventative tips include:

1. Use a sterile potting mix, rather than soil from your garden.

The fungi that cause this disease live in the soil, so preventing soil contact with your vulnerable seedlings is the first good place to start.

Top-down view of pepper seedlings in sterile soil and peat pots.

If this really isn’t possible for you, or if you plan to reuse soil mix, then you can also sterilize your soil.

You can do this by baking it in the sun. But in my experience, I’ve found that it’s quicker and easier either to use either your oven or your microwave. Personally, I prefer doing it in the microwave, as heating in the oven can generate a funky smell.

Just put your soil mix in a suitable container, cover it loosely, and heat on high for eight to 10 minutes.  It will get hotter than you might think, so be aware of this when you’re handling your soil mix afterwards.

Heating up your soil in this way helps to kill any fungal foes lurking within.

2. Use clean pots.

Fungal spores are tiny and can reside in even the smallest amount of soil residue left in pots. It’s best to sterilize your pots before using them, using a mixture of one part bleach to 10 parts water.

3. Help your seeds as much as you can.

Anything you can do to minimize your plants’ struggle helps to maximize their strength.

This includes planting them at the right depth, so they don’t have to work so hard to germinate, getting your soil substrate mix right, and choosing a sunny, warm spot for them to thrive in.

4. Don’t overcrowd your seedlings.

This isn’t because your seedlings don’t like company, but because ensuring room for good air circulation is key to preventing fungal disease from gaining a foothold.

Seedlings in a plastic start tray with adequate airflow.

Going one step further, this could even include using a fan to help circulate air around your baby plants.

5. Water from the bottom up.

Watering from the bottom up means that the seeding itself stays dry, and is therefore more protected.

You could also add some surface sand or gravel around your seedlings to help keep them high and dry.

Continuing with the irrigation theme, it’s also important not to over-water plant starts.

Learn more about this method in our guide.

6. Remove any suspect plants immediately.

I’m the first to become emotionally attached to my baby plants, and I am absolutely loathe to kill any of them. But it’s better to be ruthless here.

The moment you suspect one plant might be showing signs of damping off, it’s best to get him out of there to stop him from infecting his neighbors. Better safe than sorry!

Protection Tips

In my experience, conventional fungicides aren’t really worth trying. But I have had luck with a few of these homemade protective concoctions.

To be clear, they are only useful to protect against – not to cure – this disease. But they can give you that little edge that might make all the difference.

  • A strong brew of chamomile or cinnamon tea isn’t just a nice nightcap for us. You can also use it to water and/or mist your seedlings.
  • Mix in a splash of hydrogen peroxide per quart of water and mist seedlings with it.
  • Apply a light dusting of cinnamon to the soil surface. I’ve found this to be especially effective!
  • Applications of compost tea may also help, as it is full of beneficial bacteria and fungi that outcompete many bad pathogens.

Remember Your P’s!

And here I don’t mean please! Protection and prevention are the name of the game in beating damping off. By following all the tips above, you stand a fair chance of avoiding and even overcoming this disease.

Have you had any experience with damping off? Or have any extra tips to add? Let me know in the comments section below!

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Photo of author
With a passion for soil health and growing trees, Natasha Foote is a biologist who was hit with a serious case of green fingers, and decided to swap sterile laboratories for getting her hands dirty in the soil. Formerly a farmer and researcher working with the agroforestry project Mazi Farm in Greece, when she wasn't working on the farm, she was busy studying soil biology under the microscope. Now, you can find her in the south of France where, in between enjoying all the fresh peaches, plums, apricots, and cherries that the area has to offer, she's working on various agricultural projects whilst writing about all things green.
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Prashant Somani
Prashant Somani (@guest_6965)
4 years ago

Thats a good article

Annana (@guest_11806)
3 years ago

Excellent article! Thank you for sharing your knowledge and experience. I am new to gardening and I’m very glad to have found your article! Concise and informative, and humorous! I enjoy your writing style! Thank you!

Clare Groom
Clare Groom(@clareg)
Reply to  Annana
3 years ago

Thank you for your kind words Annana. Happy gardening!

Tim (@guest_15559)
2 years ago

What does “water from the bottom up” mean though?

Clare Groom
Clare Groom(@clareg)
Reply to  Tim
2 years ago

Hi Tim,
This refers to the method of bottom-watering plants, which you can learn more about in our guide.

Amy InNH
Amy InNH (@guest_40578)
5 months ago

Thanks, will try the cinnamon. No luck due to dampening off, but so love the many flowers available by seed only, I’m driven to try again.

Clare Groom
Clare Groom(@clareg)
Reply to  Amy InNH
5 months ago

Thanks for reading, Amy!